Author Archives: dnh10

Procedure for Scribing

Create a new post titled with the date of the meeting
Make sure the notes include the following:
- Include at the top of the notes, the Scribe name and the persons present.
- Fill out the body of the page with any details from the meeting and add new headings as appropriate.
- Upload the pdf for the next week’s reading and provide a link to it from the notes.
Go to under and edit the page
Add a new link at the top of the page by using the insert link button or link button on the top of the bar

GECCO-2012 papers:

Hornby and Bongard: Accelerating Human-Computer Collaborative Search through Learning Comparative and Predictive User Models
Bailey et al.: Automatic Generation of Graph Models for Complex Networks by Genetic Programming
Swafford et al.: Comparing Methods for Module Identification in Grammatical Evolution
Harding et al.: MT-CGP: Mixed Type Cartesian Genetic Programming
Le Goues et al.: Representations and Operators for Improving Evolutionary Software Repair
Kotzing et al.: The Max Problem Revisited: The Importance of Mutation in Genetic Programming
Harper: Spatial Co-Evolution – Quicker, Fitter and Less Bloated

Jeff Clune, Jean-Baptiste Mouret and Hod Lipson: The evolutionary origins of modularity
Torres-Sosa et al.: Criticality Is an Emergent Property of Genetic Networks that Exhibit Evolvability
Castle and Johnson: Evolving program trees with limited scope variable declarations
Kalai et al.: A Machine Learning Framework for Programming by Example
Yessenov et al.: A Colorful Approach to Programming by Example
McGregor et al.: Evolution of Associative Learning in Chemical Networks

Silva and Vanneschi Operator Equalisation, Bloat and Overfitting – This paper features the Bioababailability problem, which may be of particular interest to Zeke since it has to do with doing regression on properties of chemicals.
Hornby: ALPS: The Age-Layered Population Structure for Reducing the Problem of Premature Convergence

Genetic programming with lexicase selection for modal problems (see this paper): https://gist.github.com/2320883
Clojure code for tree-based genetic programming with tags: https://gist.github.com/1628406
A version of the tag-supporting Clojure tree evaluator that handles tagged-with-arg: https://gist.github.com/1655374
Clojure code for a simple genetic programming system with trivial geography, for demonstration purposes: https://gist.github.com/1452484
Clojure code for a simple genetic programming system, for demonstration purposes: https://gist.github.com/1297325
Clojure code for tree-based genetic programming. Like evolvefn.clj but doesn’t call eval: https://gist.github.com/3398614
A simple binary genetic algorithm in Clojure, to demonstrate one way to write an evolutionary loop: gist.github.com/1291789